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Budget of $330,000
To Do
- Done: Find a spot at DSOC for test system. 253T if we buy a rack.
- Talk with SSA and VLASS about how we actually use these remote clusters (e.g.Staging, flocking, etc)Get account number and routing number.
- Buy test system
- Talk with Pueto Rico about their technical situationAsk David if there are enough Red Hat licenses for RADIAL or if we will need to get more licenses
- Think about getting drives from third party instead of Dell and sparing them ourselves.
- prefer 208V for us and the remote site(s)
- Install a 208V circuit for our reserved space (253T) in the server room.
- Could use PD1-B breakers 7, 9, 11
- Think about getting the same drives for the OS that we get for the Think about getting the same drives for the OS that we get for the data array. It's simpler but perhaps slower.
- Who is going to put all the RAM and drives in the servers?
- Work on a price spreadsheet
- Learn Ansible?
Timeline
- Buy test system as soon as practical (assuming the project is still a go)
- Does Jeff Kern know if this is a go or not
- Tony apparently told Jeff it is still a go.
- Done: Talk to Matthew about where to put this stuff
- May 3, 2022 krowe: talked to Matthew and Peter. RADIAL has space 253T reserved.
- Does Jeff Kern know if this is a go or not
- Buy production system by July
- Receive production system by Aug
- Install production system by Dec
- Buy production system about 6 months after test system
- Receive production system about 7 months after test system
- Install production system about 10 months after test system
- Running about 12 months after test systemRunning in Jan. 2023
Data Path
This is conceptual at this point. Need to talk with SSA and VLASS about this.
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- Get NRAO jobs on the remote racks. This may depend on how we want to use these remote racks. If we want them to do specific types of jobs then ClassAd options may be the solution. If we want them as overflow for jobs run at NRAO then flocking may be the solution. Perhaps we want both flocking and ClassAd options. Actually flocking may be the best method because I think it doesn't require the execute nodes to have external network access.
- Staging and submitting remotely?
- Flocking?
- Classad options? I think this will require the execute hosts to have routable IPs because our submit host will talk directly to them and vice-versa. Could CCB help here?
- Other?
- Remote HTCondor concerns
- Do we want our jobs to run an NRAO user like vlapipe, or nobody?
- Do we want remote institution jobs to run as the remote institution user, some dedicated user, or nobody?
- Need to support 50% workload for NRAO and 50% workload for remote institution. How?
- Could have 15 nodes for us and 15 nodes for them
- What if we do nothing? HTCondor's fair-share algorithm may do the work for us if all our jobs are run as user vlapipe or something like that.
- Use RANK, and therefore preemption. https://htcondor-wiki.cs.wisc.edu/index.cgi/wiki?p=HowToConfigPrioritiesForUsers
- Group Accounting
- User Priority https://htcondor-wiki.cs.wisc.edu/index.cgi/wiki?p=HowToSetUserPriority
- Share disk space on head node 50% NRAO and 50% remote institution. It might be nice to use something like quotas or LVM so that we can change the disk usage dynamically for times when either NRAO or local needs more space.
- Two partitions: one for NRAO and one for remote institution?
Documentation
- One partition with quotas? https://access.redhat.com/documentation/en-us/red_hat_enterprise_linux/7/html/storage_administration_guide/xfsquota
- LVM?
Documentation
- A projectbook like we did A projectbook like we did for USNO could be appropriate
- Process diagrams (how systems boot, how jobs get started from NRAO and run, how remote institutions start jobs, etc)
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Non-flocking just requires ssh access from probably mcilroy, and to gibson.
NRAO side
- NRAO -> remote head node on port 22 (ssh)
- Submit Host -> remote head node (condor_collector) on port 9618 (HTCondor) for flocking
- Submit Host <- remote head node (condor_negotiator) on port 9618 (HTCondor) for flocking
- mcilroy has external IPs (146.88.1.66 for 1Gb/s and 146.88.10.66 for 10Gb/s). Is the container listening?
- Submit Host <- remote execute hosts (condor_starter) on port 9618 (HTCondor) for flocking
- Submit Host (condor_shadow) -> remote execute hosts (condor_starter) on port 9618 (HTCondor) for flocking. CCB might alleviate this.
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- DNS
- What DNS domain will these hosts be in? nrao.edu? remote-institution.site? other?
- DHCP
- SMTP
- NTP
- NFS
- LDAP? How do we handle accounts? I think we will want accounts on at least the head node. The execution nodes could run everything as nobody or as real users. If we want real users on the execute hosts then we should use a directory service which should probably be LDAP. No sense in teaching folks how to use NIS anymore.
- remote institution accounts only?
- ssh
- rsync (nraorsync_plugin.py)
- NAT so the nodes can download/upload data
- TFTP (for OSes and switch)
- condor (port 9618) https://htcondor-wiki.cs.wisc.edu/index.cgi/wiki?p=HowToMixFirewallsAndHtCondor
- ganglia
- nagios
Operating System
- Must support CASA
- Will need a patching/updating mechanism
- How to boot diskless OS images
- I am not finding any new sexy software packages to automate PXE+DHCP+TFTP+NFS, so we will keep doing it the way we have been for years https://access.redhat.com/documentation/en-us/red_hat_enterprise_linux/8/html/managing_storage_devices/setting-up-a-remote-diskless-system_managing-storage-devices
- One OS image for both our use and remote institution use, or multiple OS images?
- Use containers (docker, singularity/apptainer, kubernetes, mesos, etc)?
- Ask Greg at CHTC what they use
- They use disked OSes and puppet to maintain it
- What Linux distrobution to use?
- Can we use Red Hat with our current license? I have looked in JDE and I can't find a recent subscription. Need to ask David.
- Should we buy Red Hat licenses like we did for USNO?
- USNO is between $10K and $15K per year for 81 licensed nodes. This may not be an EDU license.
- NRAO used to have a 1,000 host license for Red Hat but I don't know what they have now.
- Do we even want to use Red Hat?
- Alternatives would be Rocky Linux or AlmaLinux since CentOS is essentially dead
- What version do we use RHEL7 or RHEL8?
Third party software for VLASS
- CASA
- HTCondor
- Will need a way to maintain the software
- stow, rpm, modules, containers?
Third party software for remote institution
- Will need a way to maintain software for the remote institution site
- Will need a way to maintain the software
- stow, rpm, modules, containers?
Management Access
- PDU
- UPS
- BMC/IPMI
- switch
Maintenance
- replace disk (remote institution admin)
- replace/reseat DIMM (remote institution admin)
- replace power supply (remote institution admin)
- NRAO may handle replacement hardware. Drop ship. Spare ourselves?
- Patching OS images (NRAO)
- Patching third party software like CASA and HTCondor (NRAO)
- Altering OS images (NRAO)
Hardware
- Will this vary depending on site?
- 2022-10-26 krowe: it is looking like the institution will own the equpment. Either they buy it with their own money like UPR-M or AUI gives them a grant and they buy it. Either way, they own it. So, I think we can expect the hosts to be in their DNS domain. Which is probably for the best. We can make CNAMEs for each head node if needed.
- So what IP range should we use? That may depend on the site as each site may use non-routable IP ranges differently.
- DHCP
- SMTP
- NTP or chrony
- What timezone should these be in? I think the choices are
- Mountain - Perhaps the most convenient for NRAO users and consistant between the sites.
- Local - Makes the most sence to the local users but means differences between the sites.
- UTC - equally annoying for all.
- What timezone should these be in? I think the choices are
- NFS
- Directory Server
- NIS? Probably not. RHEL9 will not support NIS.
- OpenLDAP
- 389 Directory Server? (previously Fedora Directory Server)
- Identity Management
- FreeIPA
- How do we handle accounts? I think we will want accounts on at least the head node. The execution nodes could run everything as nobody or as real users. If we want real users on the execute hosts then we should use a directory service which should probably be LDAP. No sense in teaching folks how to use NIS anymore.
- remote institution accounts only?
- 2022-10-26 krowe: RHEL8 and later don't come with OpenLDAP anymore. Red Hat wants you to use either their 389DS or IDM or RHDS or some other thing that gets them money. It's all very confusing
- ssh
- rsync (nraorsync_plugin.py)?
- NAT so the nodes can download/upload data?
- TFTP (for OSes and switch)
- condor (port 9618) https://htcondor-wiki.cs.wisc.edu/index.cgi/wiki?p=HowToMixFirewallsAndHtCondor
- nagios
- ganglia
- Ganglia hasn't been updated since 2015 so perhaps it is time to look for something else.
- Prometheus/Graphana
- Zabbix
Operating System
- Must support CASA
- Will need a patching/updating mechanism
- How to boot diskless OS images
- I am not finding any new sexy software packages to automate PXE+DHCP+TFTP+NFS, so we will keep doing it the way we have been for years https://access.redhat.com/documentation/en-us/red_hat_enterprise_linux/8/html/managing_storage_devices/setting-up-a-remote-diskless-system_managing-storage-devices
- One OS image for both our use and remote institution use, or multiple OS images?
- Use containers (docker, singularity/apptainer, kubernetes, mesos, etc)?
- Ask Greg at CHTC what they use
- They use disked OSes and puppet to maintain it
- What Linux distrobution to use?
- Can we use Red Hat with our current license? I have looked in JDE and I can't find a recent subscription. Need to ask David.
- We have a 1,000 FTE license with up to 20,000 installations allowed. But since we are either selling the equipment to the institution or asking them to buy it themselves, at least with UPRM, I don't see how we can use our RHEL license legally. Asking each institution to aquire an RHEL license sounds like a recepie for failure so I think open source OS is the answer.
- Should we buy Red Hat licenses like we did for USNO?
- USNO is between $10K and $15K per year for 81 licensed nodes. This may not be an EDU license.
- NRAO used to have a 1,000 host license for Red Hat but I don't know what they have now.
- I don't want to maintain licenses for up to 10 differenct installs. I don't think the institutions will want to purchase and maintain a license.
- Do we even want to use Red Hat?
- Alternatives would be Rocky Linux or AlmaLinux or CentoOS Stream
- Some sites will own their equipment like UPR-M. Probably most sites the equipment will be owned by NRAO.
- Can we use Red Hat with our current license? I have looked in JDE and I can't find a recent subscription. Need to ask David.
- What version do we use RHEL7 or RHEL8 or RHEL9? Remember CASA needs to support it.
- What OSes is CASA is verified against? I am pretty sure RHEL but what about CentOS or Rocky or ALMA, etc?.
- What version of CASA does VLASS need?
- The cost of RHEL is pretty small compared to the hardware.
- UPRM has their own money but the other institutions will either get a grant or money from us so we can say what OS they use and pay for.
- Should pull in Matthew or Schlake on this decision.
- Should we use Ansible for deployments?
- 2022-10-21 krowe: jkern talked to business office and they prefer that AUI gives the money to Morgan State and Morgan State buys the equipment. So Morgan State will own it. NRAO can stipulate you will only get the money if you buy what we recommend.
- 2022-10-24 krowe: CASA is verified against RHEL8. CentOS Stream 8 is a constantly moving target. There is no CentOS Stream 8.1 or 8.2 it is always the cutting edge of RHEL. I don't like that. I would much rather have version numbers that I can compare to RHEL. So that is a vote against CentOS Stream and for Rocky or Alma. I just checked Scientific Linux (maintinaed by Fermilab and CERN) and they are moving to CentOS Stream8. So there will not be a Scientific Linux 8.
Third party software for VLASS
- CASA what version?
- HTCondor
- Will need a way to maintain the software
- stow, rpm, modules, containers?
Third party software for remote institution
- Will need a way to maintain software for the remote institution site
- Will need a way to maintain the software
- stow, rpm, modules, containers?
Management Access
- PDU
- UPS
- BMC/IPMI
- switch
Maintenance
- replace disk (remote institution admin)
- replace/reseat DIMM (remote institution admin)
- replace power supply (remote institution admin)
- NRAO may handle replacement hardware. Drop ship. Spare ourselves?
- Patching OS images (NRAO)
- Patching third party software like CASA and HTCondor (NRAO)
- Altering OS images (NRAO)
Hardware
- Cabinet Rack: Doors front and rear locking with mesh. Width: 19". Height: 42U is most common. Depth: 42" is most common. Rack must support at least 2,000 lbs static load
- Great Lakes GL840ES-2442-B-MS, $3,900 This is what we usually get https://greatcabinets.com/product/es-ms/
- APC NetShelter SX AR3100, $1,875 https://www.apc.com/shop/us/en/products/APC-NetShelter-SX-Server-Rack-Enclosure-42U-Black-1991H-x-600W-x-1070D-mm/P-AR3100
- APC NetShelter SX AR3100SP, designed for re-shipping after equipped, $2,550 https://www.apc.com/shop/us/en/products/APC-NetShelter-SX-Server-Rack-Enclosure-42U-Shock-Packaging-2000-lbs-Black-1991H-x-600W-x-1070D-mm/P-AR3100SP
- Power Strips: How many Power Strips? What plug? What voltage? This may very across sites. What if the site has two power sources?
- 208V = APC APDU9965, 8.6kW, zeroU, Input is NEMA L21-30P 3phase, Outputs are 21x C13/C15 and 3x C19/C21, $2,100
- Great Lakes GL840ES-2442-B-MS, $3,900 This is what we usually get https://greatcabinets.com/product/es-ms/
- APC NetShelter SX AR3100, $1,875 https://www.apc.com/shop/us/en/products/APC-NetShelter-SX-Server-Rack-Enclosure-42U-Black-1991H-x-600W-x-1070D-mm/P-AR3100 APC NetShelter SX AR3100SP, designed for re-shipping after equipped, $2,550 Rack-PDU-9000-switched-0U-8-6kW-208V-21-C13-and-C15-3-C19-and-C21-sockets/P-APDU9965
- Need 2. For 30 nodes, assuming 400W each we will need 2 of these power strips (30 * 400W = 12,000W)
- 208V = APC APDU9967, 17kW, zeroU, Input is IEC60309 60A 3P+PE 3Phase, Outputs are 42x C13/C15 and 6x C19/C21, $3,775 https://www.apc.com/shop/us/en/products/APC-NetShelterRack-SXPDU-Server9000-Rackswitched-Enclosure0U-42U17-Shock3kW-Packaging208V-200042-lbsC13-Blackand-1991HC15-x6-600WC19-x-1070D-mm/P-AR3100SP
- and-C21-sockets/P-APDU9967
- Need 1. For 30 nodes, assuming 400W each we will need only 1 of these power strips (30 * 400W = 12,000W)
- 120V = APC AP8932, 2.8kW
- 208V = APC APDU9965, 8.6kW, zeroU, Input is NEMA L21L5-30P 3phase, Outputs are 21x C13/C15 and 3x C19/C21, $2,100 24x NEMA 5-20R, $1,450 https://www.apc.com/shop/us/en/products/APC-Rack-PDU-90002G-switched-0U-8-6kW-208V-21-C13-and-C15-3-C19-and-C21-sockets/P-APDU996530A-100V-to-120V-24-NEMA-5-20R-sockets/P-AP8932
- Need 5. For 30 nodes, assuming 400W each we will need 5 of these power strips (30 * 400W = 12,000W)
- Stagger startups on PDU
- UPS: for just the head node and switch? This may depend on the voltage of the PDUs.
- 208V = APC Smart-UPS X SMX2200R2HVNC, 2200VA, 2U, Input is IEC-C20, Outputs are 8x C13 and 1x C19, comes with network card, $3,125 208V = APC APDU9967, 17kW, zeroU, Input is IEC60309 60A 3P+PE 3Phase, Outputs are 42x C13/C15 and 6x C19/C21 https://www.apc.com/shop/us/en/products/APC-Smart-UPS-RackX-PDULine-9000Interactive-switched2200VA-0URack-17tower-3kW2U-208V-42230V-8x-C13-and-C15-6-C19-and-C21-sockets-1x-C19-IEC-Network-card-Extended-runtime-Rail-kit-included/P-APDU9967SMX2200R2HVNC
- 120V = APC AP8932, 2.8kW, zeroUSmart-UPS SMT1500RM2UC, 1500VA, 2U, Input is NEMA L55-30P15P, Outputs are 24x 6x NEMA 5-20R15R, $1,450 050 https://www.apc.com/shop/us/en/products/APC-Rack-PDU-2G-switched-0U-30A-100V-to-120V-24-NEMA-5-20R-sockets/P-AP8932
- Stagger startups on PDU
- Switch: Cisco Catalyst C9300X-48TX
48 Data, 48x 10G Multigigabit
- 100M, 1G, 2.5G, 5G, or 10 Gbps
- Switching capacity 2,000 Gbps
- Nine optional Modular Uplinks 100G/40G/25G/10G/1G
- Redundant Power Supply 715 W
- $12K
- Environmental Monitoring: Add-on to the APC PDU
- APC AP9335TH, Temperature and Humidity Sensor, length is 3.9m, $190
- 208V = APC Smart-UPS X SMX2200R2HVNC, 2200VA, 2U, Input is IEC-C20, Outputs are 8x C13 and 1x C19, comes with network card, $3,125 https://www.apc.com/shop/us/en/products/APC-Smart-UPS-X-Line-Interactive-2200VA-Rack-tower-2U-208V-230V-8x-C13-1x-C19-IEC-Network-card-Extended-runtime-Rail-kit-included/P-SMX2200R2HVNC/shop/us/en/products/APC-Temperature-Humidity-Sensor/P-AP9335TH
- KVM: rackmount, not remote, and patch cables
- StarTech RKCONS1901, Rackmount KVM console, 1U, $990 120V = APC Smart-UPS SMT1500RM2UC, 1500VA, 2U, Input is NEMA 5-15P, Outputs are 6x NEMA 5-15R, $1,050 https://www.apccdw.com/shop/us/en/categories/power/uninterruptible-power-supply-ups-/network-and-server/smart-ups/N-1h89ykeZ11ai1p3
- Optional UPS Network Card 3 AP9640 $420 https://www.apc.com/shop/us/en/products/UPS-Network-Management-Card-3/P-AP9640
- StarTech RKCONS1901, Rackmount KVM console, 1U, $990 120V = APC Smart-UPS SMT1500RM2UC, 1500VA, 2U, Input is NEMA 5-15P, Outputs are 6x NEMA 5-15R, $1,050 https://www.apccdw.com/shop/us/en/categories/power/uninterruptible-power-supply-ups-/network-and-server/smart-ups/N-1h89ykeZ11ai1p3
- Switch: Cisco Catalyst C9300X-48TX
48 Data, 48x 10G Multigigabit
- 100M, 1G, 2.5G, 5G, or 10 Gbps
- Switching capacity 2,000 Gbps
- Nine optional Modular Uplinks 100G/40G/25G/10G/1G
- Redundant Power Supply 715 W
- $12K
- Environmental Monitoring: Add-on to the APC PDU
- APC AP9335TH, Temperature and Humidity Sensor, length is 3.9m, $190 https://www.apc.com/shop/us/en/products/APC-Temperature-Humidity-Sensor/P-AP9335TH
- KVM: rackmount, not remote, and patch cables
- StarTech RKCONS1901, Rackmount KVM console, 1U, $990 https://www.cdw.com/product/startech.com-rackmount-kvm-console-1u-19-lcd-vga-kvm-drawer-w-cables-usb/5103418?pfm=srh
- Ethernet cables:
- Power cables: single or Y cables depending on number and types of PDUs and number of power sources.
- Head Node: lots of disk and RAID
- iDRAC: Ask CIS what they recommend
- Memory: at least 32GB of RAM to help cache the OS image. 64GB would be even better.
- Storage mdRAID, ZFS, Btrfs, RAID card? Do we want both boot and data arrays to be the same type?
- OS/OSimages, RAID1 with or without spare? (3 disks), about 1TB
- OS: We have been making 40GB partitions for / for over a decade and that looks to still work with RHEL8.
- Swap: 0 or 8GB at most
- /export/home/<hostnmae>: services and diskless_images
- Working data/software (remote institution and nrao), RAID6 w/spare or RAID7 (9 disks), about 72TB
- An SE imaging input data size is about 10GB per job
- We need maybe 20TB+ of total space or more so maybe 60TB/2
- Carve into two partitions (NRAO data and NRAO software, remote institution data and remote institution software) each partition has data and software directories.
- OS/OSimages, RAID1 with or without spare? (3 disks), about 1TB
- Networking: May need more than one port. One for internal networking to nodes and one for external Internet access.
- 30 1U nodes or 15 2U nodes or mix? NVMe drives for nodes. Swap drive?
- Dual ~3GHz, ~12Core CPUs
- 512GB or more RAM
- NVMe for scratch and swap 6TB or more
- Ethernet cables:
- Power cables: single or Y cables depending on number and types of PDUs and number of power sources.
- Head Node: lots of disk and RAID
- iDRAC: Ask CIS what they recommend
- Memory: at least 32GB of RAM to help cache the OS image. 64GB would be even better.
- Storage mdRAID, ZFS, Btrfs, RAID card? Do we want both boot and data arrays to be the same type?
- OS/OSimages, RAID1 with or without spare? (3 disks), about 1TB
- OS: We have been making 40GB partitions for / for over a decade and that looks to still work with RHEL8.
- Swap: 0 or 8GB at most
- /export/home/<hostnmae>: services and diskless_images
- Working data/software (remote institution and nrao), RAID6 w/spare or RAID7 (9 disks), about 72TB
- An SE imaging input data size is about 10GB per job
- We need maybe 20TB+ of total space or more so maybe 60TB/2
- Carve into two partitions (NRAO data and NRAO software, remote institution data and remote institution software) each partition has data and software directories.
- OS/OSimages, RAID1 with or without spare? (3 disks), about 1TB
- Networking: May need more than one port. One for internal networking to nodes and one for external Internet access.
- 30 1U nodes or 15 2U nodes or mix? NVMe drives for nodes. Swap drive?
- Dual ~3GHz, ~12Core CPUs
- 512GB or more RAM
- NVMe for scratch and swap 6TB or more
- Draws about 400W max
- GPUs: Do we get GPUs? Do we get 1U nodes with room for 1 or 2 Tesla T4 GPUs or 2U nodes with room for 1 or 2 regular GPU?
- Dell R650, dual Xeon Gold (Ice Lake) 6334 3.6GHz CPUs, 768GB RAM, 6TB - 8TB NVMe
- Dell R650, dual Xeon Silver (Ice Lake) 4309Y 2.8GHz CPUs, 768GB RAM, 6TB - 8TB NVMe
- PassMark shows the Silver to be about 85% to 95% of the Gold but the Gold is about 2.5 times the price of the Silver. For the price of 19 Gold nodes we could get 26 Silver nodes. So we could run 73% more jobs witlh Silvers but they would take maybe 15% longer to run. That looks like a win to me. (assuming 15 jobs per node). Perhaps for the test system we could purchase one of each type of CPU?
- Cooling: Assuming a 30-node cluster, we will need about 12kW or 3.5 tons or 42,000 BTU/h of cooling.GPUs: Do we get GPUs? Do we get 1U nodes with room for 1 or 2 Tesla T4 GPUs or 2U nodes with room for 1 or 2 regular GPU?
Shipping
- Drop ship everything to the site and assemble on site. This will require an NRAO person on site to assemble with a pre-built OS disk for the head node. I think this is too much work to do on site.
- Install DIMMs in nodes
- Install NVMe drives in nodes
- Rack everything
- Cable everything
- Configure switch
- Install/Configure OS
- Ship everything here and assemble then ship a rack-on-pallet.
- Mix the two. Ship minimal stuff here (head node, switch, couple of compute nodes, etc) and configure and drop ship most of the nodes to the site.
- Re-ship head node, switch, compute nodes to site
- Re-ship memory and drives to site
- A person from the remote site could travel to NM or CV to see the test system and get instruction.
...
- Voltage in server room (120V or 208V or 240V)
- Receptacles in server room (L5-30R or L21-30R or ...)
- Single or dual power feeds?
- Is power from below or from above?
- How stable is their power?
- Is there a UPS?
- Is there a generator?
- Door width and height and path to server room.
- Can a rack-on-pallet fit upright? Height: 85.79inches (2179mm) Width: 43.5inches (1105mm)
- Can a rack-on-casters fit upright? Height: 78.39inches (1991mm) Width: 23.62inches (600mm)
- NRAO-NM wide server door Height: 84inches (2108mm) Width: 46.75inches (1219mm)
- Firewalls
- How are you going to use this?
- Do you care if this is in your DNS zone or ours?
- Is NAT available for the execute hosts?
...