...
> /lustre/aoc/projects/hera/krowe/makeflow_sample/makeflow/wrapper_zen.2458098.44615.HH.uvh5.EXTRACT_AUTOS.sh > /lustre/aoc/projects/hera/krowe/makeflow_sample/makeflow/zen.2458098.44615.HH.uvh5.EXTRACT_AUTOS.log 2>&1
wrapper_zen.2458098.44615.HH.uvh5.EXTRACT_AUTOS.sh
2,3c2,3
< source ~/.bashrc
...
---
> wget --no-verbose http://proxy.chtc.wisc.edu/SQUID/chtc/python37.tar.gz
> tar xfz python37.tar.gz
> tar xfz hera_calibration_packages.tar.gz
> date
> export PYTHONPATH=${PWD}/hera_calibration_packages
> export PATH=.:${PWD}/python/bin:${PATH}
>
> #CHTC's python37 tarball has bin/python3 and not bin/pyton
> (cd python/bin ; ln -s python3 python)
>
> #cd /lustre/aoc/projects/hera/krowe/makeflow_sample/raw_data
>
> timeout 24h ./do_EXTRACT_AUTOS.sh zen.2458098.44615.HH.uvh5
>
> # Perhaps wait and see where makeflow/condor put output and error.
> #if [ $? -eq 0 ]; then
> # cd /lustre/aoc/projects/hera/krowe/makeflow_sample/makeflow
> # touch zen.2458098.44615.HH.uvh5.EXTRACT_AUTOS.out
> #else
> # mv /lustre/aoc/projects/hera/krowe/makeflow_sample/makeflow/zen.2458098.44615.HH.uvh5.EXTRACT_AUTOS.log /lustre/aoc/projects/hera/krowe/makeflow_sample/makeflow/zen.2458098.44615.HH.uvh5.EXTRACT_AUTOS.log.error
> #fi
extract_autos.py
1c1
< #!/home/nu_kscott/hera/share/miniconda3/bin/python
...